BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020D09LP1|AL427620
(1055 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig840 2019 0.0
>3x_Contig840
Length = 3380
Score = 2019 bits (1017), Expect = 0.0
Identities = 1050/1057 (99%), Gaps = 4/1057 (0%)
Strand = Plus / Plus
Query: 1 acatttatcctcctttattccactacaaagtgttcgaaaataataaaaaattacaagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1816 acatttatcctcctttattccactacaaagtgttcgaaaataataaaaaattacaagcaa 1875
Query: 61 tagacctggcgatcttaatatttggagccctagtgatgtcatacacatcctggcaaacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1876 tagacctggcgatcttaatatttggagccctagtgatgtcatacacatcctggcaaacga 1935
Query: 121 tagcattatggattcattaggaaccttatacacacaaaaagacctctcatgtataacgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1936 tagcattatggattcattaggaaccttatacacacaaaaagacctctcatgtataacgta 1995
Query: 181 tataacgttcattagttggaactctttaccgaatatcaataaaaccgggtaacattatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1996 tataacgttcattagttggaactctttaccgaatatcaataaaaccgggtaacattatct 2055
Query: 241 cttaacagtggaaatctaacttatggaaatcgaactaaagatttaaagagactgataata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2056 cttaacagtggaaatctaacttatggaaatcgaactaaagatttaaagagactgataata 2115
Query: 301 tggaaaatcagtttggaaagggtggcgaatggagagaagtgaggtcaattcgttatatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2116 tggaaaatcagtttggaaagggtggcgaatggagagaagtgaggtcaattcgttatatat 2175
Query: 361 cgagttagtaaggagcgcaatacatcagtaaaacattatgccaccaaaggaagactggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2176 cgagttagtaaggagcgcaatacatcagtaaaacattatgccaccaaaggaagactggga 2235
Query: 421 gaagtacaaggctcctattgaagacgaggaatcgaaggaggaaaagaaggttgtgccact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2236 gaagtacaaggctcctattgaagacgaggaatcgaaggaggaaaagaaggttgtgccact 2295
Query: 481 ttccgaa-gggacattgaagtgttgaagacttacggagcagcaccatacgctaagaagct 539
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2296 ttccgaaggggacattgaagtgttgaagacttacggagcagcaccatacgctaagaagct 2355
Query: 540 taaatctatcgagaatgacttgaaggaaattgagaagaagattaaggagaaagctggtgt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2356 taaatctatcgagaatgacttgaaggaaattgagaagaagattaaggagaaagctggtgt 2415
Query: 600 gaaagagagtgatacagggttagcaccatcacatttatgggatattgttggtgatagaca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2416 gaaagagagtgatacagggttagcaccatcacatttatgggatattgttggtgatagaca 2475
Query: 660 aaggttaagtgaggaacaaccactacaggtggctagatgcaccaagattatcaaggcaga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2476 aaggttaagtgaggaacaaccactacaggtggctagatgcaccaagattatcaaggcaga 2535
Query: 720 aaagccccagagaagtgggaacgcactaggaggagatgctgatggaaatggagttgcagc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2536 aaagccccagagaagtgggaacgcactaggaggagatgctgatggaaatggagttgcagc 2595
Query: 780 agcagcagcagcagcagccgcagcagcgsccgctgcttcttggcacagaggatgaagacg 839
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 2596 agcagcagcagcagcagccgcagcagcggccgctgcttc-tggcacagaggatgaagacg 2654
Query: 840 atgacgatgctaagtatgttatcaacttgaagcaaatagcgaagttcgttgtcggactag 899
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2655 atgacgatgctaagtatgtgatcaacttgaagcaaatagcgaagttcgttgtcggactag 2714
Query: 900 gagagcgtgtttctccaacggatattgaagaaggtatgcgtgttggtgtggacagatcca 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2715 gagagcgtgtttctccaacggatattgaagaaggtatgcgtgttggtgtggacagatcca 2774
Query: 960 agtaccaaatcgaattaccattgcctccaagaattgatccaagtgttactatgatgacag 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2775 agtaccaaatcgaattaccattgcctccaagaattgatccaagtgttactatgatgacag 2834
Query: 1020 tgg-agamaaa-cagacgttacatattcagatgttgg 1054
||| ||| ||| |||||||||||||||||||||||||
Sbjct: 2835 tggaagaaaaaccagacgttacatattcagatgttgg 2871
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8747
Number of Sequences: 1807
Number of extensions: 8747
Number of successful extensions: 472
Number of sequences better than 1.0e-20: 1
length of query: 1055
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1039
effective length of database: 10,329,639
effective search space: 10732494921
effective search space used: 10732494921
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)